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Arabidopsis proteins (AlphaFold) · Light, stress & photosynthesis: 70 3D models

DNA, RNA, nucleic-acid drugs, gene editing, proteins and 300+ real PDB structures (real sizes 1–100 nm). Each one is a ready-made 3D model you can turn, recolour and place in a figure — open BioDiorama and type its name in the Library search.

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Ethylene-responsive transcription factor ABI4 (ABI4, Arabidopsis) — Ethylene-responsive transcription factor ABI4 — thale cress (Arabidopsis thaliana) protein (gene ABI4, 328 amino acids, UniProt A0MES8). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Ribulose bisphosphate carboxylase large chain (rbcL, Arabidopsis) — Ribulose bisphosphate carboxylase large chain — thale cress (Arabidopsis thaliana) protein (gene rbcL, 479 amino acids, UniProt O03042). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein EARLY FLOWERING 4 (ELF4, Arabidopsis) — Protein EARLY FLOWERING 4 — thale cress (Arabidopsis thaliana) protein (gene ELF4, 111 amino acids, UniProt O04211). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein phosphatase 2C 77 (ABI2, Arabidopsis) — Protein phosphatase 2C 77 — thale cress (Arabidopsis thaliana) protein (gene ABI2, 423 amino acids, UniProt O04719). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein BRASSINOSTEROID INSENSITIVE 1 (BRI1, Arabidopsis) — Protein BRASSINOSTEROID INSENSITIVE 1 — thale cress (Arabidopsis thaliana) protein (gene BRI1, 1196 amino acids, UniProt O22476). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor HY5 (HY5, Arabidopsis) — Transcription factor HY5 — thale cress (Arabidopsis thaliana) protein (gene HY5, 168 amino acids, UniProt O24646). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phototropin-1 (PHOT1, Arabidopsis) — Phototropin-1 — thale cress (Arabidopsis thaliana) protein (gene PHOT1, 996 amino acids, UniProt O48963). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYR1 (PYR1, Arabidopsis) — Abscisic acid receptor PYR1 — thale cress (Arabidopsis thaliana) protein (gene PYR1, 191 amino acids, UniProt O49686). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor PIF3 (PIF3, Arabidopsis) — Transcription factor PIF3 — thale cress (Arabidopsis thaliana) protein (gene PIF3, 524 amino acids, UniProt O80536). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYL4 (PYL4, Arabidopsis) — Abscisic acid receptor PYL4 — thale cress (Arabidopsis thaliana) protein (gene PYL4, 207 amino acids, UniProt O80920). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Heat stress transcription factor A-2 (HSFA2, Arabidopsis) — Heat stress transcription factor A-2 — thale cress (Arabidopsis thaliana) protein (gene HSFA2, 345 amino acids, UniProt O80982). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYL2 (PYL2, Arabidopsis) — Abscisic acid receptor PYL2 — thale cress (Arabidopsis thaliana) protein (gene PYL2, 190 amino acids, UniProt O80992). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Calcineurin B-like protein 4 (CBL4, Arabidopsis) — Calcineurin B-like protein 4 — thale cress (Arabidopsis thaliana) protein (gene CBL4, 222 amino acids, UniProt O81223). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein EARLY FLOWERING 3 (ELF3, Arabidopsis) — Protein EARLY FLOWERING 3 — thale cress (Arabidopsis thaliana) protein (gene ELF3, 695 amino acids, UniProt O82804). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phytochrome A (PHYA, Arabidopsis) — Phytochrome A — thale cress (Arabidopsis thaliana) protein (gene PHYA, 1122 amino acids, UniProt P14712). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phytochrome B (PHYB, Arabidopsis) — Phytochrome B — thale cress (Arabidopsis thaliana) protein (gene PHYB, 1172 amino acids, UniProt P14713). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Pyrophosphate-energized vacuolar membrane proton pump 1 (AVP1, Arabidopsis) — Pyrophosphate-energized vacuolar membrane proton pump 1 — thale cress (Arabidopsis thaliana) protein (gene AVP1, 770 amino acids, UniProt P31414). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Heat stress transcription factor A-1a (HSFA1A, Arabidopsis) — Heat stress transcription factor A-1a — thale cress (Arabidopsis thaliana) protein (gene HSFA1A, 495 amino acids, UniProt P41151). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Chaperone protein ClpB1 (CLPB1, Arabidopsis) — Chaperone protein ClpB1 — thale cress (Arabidopsis thaliana) protein (gene CLPB1, 911 amino acids, UniProt P42730). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein phosphatase 2C 56 (ABI1, Arabidopsis) — Protein phosphatase 2C 56 — thale cress (Arabidopsis thaliana) protein (gene ABI1, 434 amino acids, UniProt P49597). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Photosystem II protein D1 (psbA, Arabidopsis) — Photosystem II protein D1 — thale cress (Arabidopsis thaliana) protein (gene psbA, 353 amino acids, UniProt P83755). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein CCA1 (CCA1, Arabidopsis) — Protein CCA1 — thale cress (Arabidopsis thaliana) protein (gene CCA1, 608 amino acids, UniProt P92973). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Regulatory protein NPR1 (NPR1, Arabidopsis) — Regulatory protein NPR1 — thale cress (Arabidopsis thaliana) protein (gene NPR1, 593 amino acids, UniProt P93002). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phototropin-2 (PHOT2, Arabidopsis) — Phototropin-2 — thale cress (Arabidopsis thaliana) protein (gene PHOT2, 915 amino acids, UniProt P93025). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
B3 domain-containing transcription factor ABI3 (ABI3, Arabidopsis) — B3 domain-containing transcription factor ABI3 — thale cress (Arabidopsis thaliana) protein (gene ABI3, 720 amino acids, UniProt Q01593). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Low-temperature-induced 78 kDa protein (RD29A, Arabidopsis) — Low-temperature-induced 78 kDa protein — thale cress (Arabidopsis thaliana) protein (gene RD29A, 710 amino acids, UniProt Q06738). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Zinc finger protein CONSTANS (CO, Arabidopsis) — Zinc finger protein CONSTANS — thale cress (Arabidopsis thaliana) protein (gene CO, 373 amino acids, UniProt Q39057). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Serine/threonine-protein kinase SRK2D (SRK2D, Arabidopsis) — Serine/threonine-protein kinase SRK2D — thale cress (Arabidopsis thaliana) protein (gene SRK2D, 362 amino acids, UniProt Q39192). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Serine/threonine-protein kinase SRK2I (SRK2I, Arabidopsis) — Serine/threonine-protein kinase SRK2I — thale cress (Arabidopsis thaliana) protein (gene SRK2I, 361 amino acids, UniProt Q39193). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein LHY (LHY, Arabidopsis) — Protein LHY — thale cress (Arabidopsis thaliana) protein (gene LHY, 645 amino acids, UniProt Q6R0H1). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYL9 (PYL9, Arabidopsis) — Abscisic acid receptor PYL9 — thale cress (Arabidopsis thaliana) protein (gene PYL9, 187 amino acids, UniProt Q84MC7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Sodium transporter HKT1 (HKT1, Arabidopsis) — Sodium transporter HKT1 — thale cress (Arabidopsis thaliana) protein (gene HKT1, 506 amino acids, UniProt Q84TI7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYL10 (PYL10, Arabidopsis) — Abscisic acid receptor PYL10 — thale cress (Arabidopsis thaliana) protein (gene PYL10, 183 amino acids, UniProt Q8H1R0). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYL6 (PYL6, Arabidopsis) — Abscisic acid receptor PYL6 — thale cress (Arabidopsis thaliana) protein (gene PYL6, 215 amino acids, UniProt Q8S8E3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYL1 (PYL1, Arabidopsis) — Abscisic acid receptor PYL1 — thale cress (Arabidopsis thaliana) protein (gene PYL1, 221 amino acids, UniProt Q8VZS8). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor PIF4 (PIF4, Arabidopsis) — Transcription factor PIF4 — thale cress (Arabidopsis thaliana) protein (gene PIF4, 430 amino acids, UniProt Q8W2F3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Serine/threonine-protein kinase SRK2E (SRK2E, Arabidopsis) — Serine/threonine-protein kinase SRK2E — thale cress (Arabidopsis thaliana) protein (gene SRK2E, 362 amino acids, UniProt Q940H6). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYL5 (PYL5, Arabidopsis) — Abscisic acid receptor PYL5 — thale cress (Arabidopsis thaliana) protein (gene PYL5, 203 amino acids, UniProt Q9FLB1). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
CBL-interacting serine/threonine-protein kinase 24 (CIPK24, Arabidopsis) — CBL-interacting serine/threonine-protein kinase 24 — thale cress (Arabidopsis thaliana) protein (gene CIPK24, 446 amino acids, UniProt Q9LDI3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein phosphatase 2C 7 (HAB2, Arabidopsis) — Protein phosphatase 2C 7 — thale cress (Arabidopsis thaliana) protein (gene HAB2, 511 amino acids, UniProt Q9LNP9). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic (NCED3, Arabidopsis) — 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic — thale cress (Arabidopsis thaliana) protein (gene NCED3, 599 amino acids, UniProt Q9LRR7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor ICE1 (SCRM, Arabidopsis) — Transcription factor ICE1 — thale cress (Arabidopsis thaliana) protein (gene SCRM, 494 amino acids, UniProt Q9LSE2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Dehydration-responsive element-binding protein 1A (DREB1A, Arabidopsis) — Dehydration-responsive element-binding protein 1A — thale cress (Arabidopsis thaliana) protein (gene DREB1A, 216 amino acids, UniProt Q9M0L0). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
ABSCISIC ACID-INSENSITIVE 5-like protein 6 (ABF3, Arabidopsis) — ABSCISIC ACID-INSENSITIVE 5-like protein 6 — thale cress (Arabidopsis thaliana) protein (gene ABF3, 454 amino acids, UniProt Q9M7Q3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
MADS-box protein FLOWERING LOCUS C (FLC, Arabidopsis) — MADS-box protein FLOWERING LOCUS C — thale cress (Arabidopsis thaliana) protein (gene FLC, 196 amino acids, UniProt Q9S7Q7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein ABSCISIC ACID-INSENSITIVE 5 (ABI5, Arabidopsis) — Protein ABSCISIC ACID-INSENSITIVE 5 — thale cress (Arabidopsis thaliana) protein (gene ABI5, 442 amino acids, UniProt Q9SJN0). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein GIGANTEA (GI, Arabidopsis) — Protein GIGANTEA — thale cress (Arabidopsis thaliana) protein (gene GI, 1173 amino acids, UniProt Q9SQI2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic acid receptor PYL3 (PYL3, Arabidopsis) — Abscisic acid receptor PYL3 — thale cress (Arabidopsis thaliana) protein (gene PYL3, 209 amino acids, UniProt Q9SSM7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein SUPPRESSOR OF PHYA-105 1 (SPA1, Arabidopsis) — Protein SUPPRESSOR OF PHYA-105 1 — thale cress (Arabidopsis thaliana) protein (gene SPA1, 1029 amino acids, UniProt Q9SYX2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein phosphatase 2C 16 (HAB1, Arabidopsis) — Protein phosphatase 2C 16 — thale cress (Arabidopsis thaliana) protein (gene HAB1, 511 amino acids, UniProt Q9CAJ0). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Lipase-like PAD4 (PAD4, Arabidopsis) — Lipase-like PAD4 — thale cress (Arabidopsis thaliana) protein (gene PAD4, 541 amino acids, UniProt Q9S745). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
LRR receptor-like serine/threonine-protein kinase EFR (EFR, Arabidopsis) — LRR receptor-like serine/threonine-protein kinase EFR — thale cress (Arabidopsis thaliana) protein (gene EFR, 1031 amino acids, UniProt C0LGT6). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Abscisic-aldehyde oxidase (AAO3, Arabidopsis) — Abscisic-aldehyde oxidase — thale cress (Arabidopsis thaliana) protein (gene AAO3, 1332 amino acids, UniProt Q7G9P4). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Two-component response regulator-like APRR1 (APRR1, Arabidopsis) — Two-component response regulator-like APRR1 — thale cress (Arabidopsis thaliana) protein (gene APRR1, 618 amino acids, UniProt Q9LKL2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phytochrome D (PHYD, Arabidopsis) — Phytochrome D — thale cress (Arabidopsis thaliana) protein (gene PHYD, 1164 amino acids, UniProt P42497). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor LUX (LUX, Arabidopsis) — Transcription factor LUX — thale cress (Arabidopsis thaliana) protein (gene LUX, 323 amino acids, UniProt Q9SNB4). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein EDS1L (EDS1, Arabidopsis) — Protein EDS1L — thale cress (Arabidopsis thaliana) protein (gene EDS1, 623 amino acids, UniProt Q9XF23). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein EDS1 (EDS1, Arabidopsis) — Protein EDS1 — thale cress (Arabidopsis thaliana) protein (gene EDS1, 623 amino acids, UniProt Q9SU72). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
LRR receptor-like serine/threonine-protein kinase FLS2 (FLS2, Arabidopsis) — LRR receptor-like serine/threonine-protein kinase FLS2 — thale cress (Arabidopsis thaliana) protein (gene FLS2, 1173 amino acids, UniProt Q9FL28). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein FLOWERING LOCUS T (FT, Arabidopsis) — Protein FLOWERING LOCUS T — thale cress (Arabidopsis thaliana) protein (gene FT, 175 amino acids, UniProt Q9SXZ2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Ultraviolet-B receptor UVR8 (UVR8, Arabidopsis) — Ultraviolet-B receptor UVR8 — thale cress (Arabidopsis thaliana) protein (gene UVR8, 440 amino acids, UniProt Q9FN03). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (BAK1, Arabidopsis) — BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 — thale cress (Arabidopsis thaliana) protein (gene BAK1, 615 amino acids, UniProt Q94F62). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
E3 ubiquitin-protein ligase COP1 (COP1, Arabidopsis) — E3 ubiquitin-protein ligase COP1 — thale cress (Arabidopsis thaliana) protein (gene COP1, 675 amino acids, UniProt P43254). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phytochrome C (PHYC, Arabidopsis) — Phytochrome C — thale cress (Arabidopsis thaliana) protein (gene PHYC, 1111 amino acids, UniProt P14714). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Photosystem I P700 chlorophyll a apoprotein A1 (psaA, Arabidopsis) — Photosystem I P700 chlorophyll a apoprotein A1 — thale cress (Arabidopsis thaliana) protein (gene psaA, 750 amino acids, UniProt P56766). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phytochrome E (PHYE, Arabidopsis) — Phytochrome E — thale cress (Arabidopsis thaliana) protein (gene PHYE, 1112 amino acids, UniProt P42498). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 3 (CYSTM3, Arabidopsis) — Protein CYSTEINE-RICH TRANSMEMBRANE MODULE 3 — thale cress (Arabidopsis thaliana) protein (gene CYSTM3, 71 amino acids, UniProt A0A178WF56). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein LONG AFTER FAR-RED 3 (LAF3, Arabidopsis) — Protein LONG AFTER FAR-RED 3 — thale cress (Arabidopsis thaliana) protein (gene LAF3, 583 amino acids, UniProt A0A1I9LN01). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Secreted transmembrane peptide 4 (STMP4, Arabidopsis) — Secreted transmembrane peptide 4 — thale cress (Arabidopsis thaliana) protein (gene STMP4, 97 amino acids, UniProt A0A1P8AQ95). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Serine rich endogenous peptide 14 (PROSCOOP14, Arabidopsis) — Serine rich endogenous peptide 14 — thale cress (Arabidopsis thaliana) protein (gene PROSCOOP14, 73 amino acids, UniProt A0JQ18). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).