Library › DNA & Proteins › C. elegans proteins (AlphaFold) · Transcription factors

C. elegans proteins (AlphaFold) · Transcription factors: 68 3D models

DNA, RNA, nucleic-acid drugs, gene editing, proteins and 300+ real PDB structures (real sizes 1–100 nm). Each one is a ready-made 3D model you can turn, recolour and place in a figure — open BioDiorama and type its name in the Library search.

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5'-3' exoribonuclease 2 homolog (xrn-2, C. elegans) — 5'-3' exoribonuclease 2 homolog — nematode worm (Caenorhabditis elegans) protein (gene xrn-2, 975 amino acids, UniProt Q9U299). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Aryl hydrocarbon receptor nuclear translocator homolog (aha-1, C. elegans) — Aryl hydrocarbon receptor nuclear translocator homolog — nematode worm (Caenorhabditis elegans) protein (gene aha-1, 453 amino acids, UniProt O02219). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
AT-rich interactive domain-containing protein cfi-1 (cfi-1, C. elegans) — AT-rich interactive domain-containing protein cfi-1 — nematode worm (Caenorhabditis elegans) protein (gene cfi-1, 467 amino acids, UniProt O02326). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
ATP-dependent RNA helicase A (rha-1, C. elegans) — ATP-dependent RNA helicase A — nematode worm (Caenorhabditis elegans) protein (gene rha-1, 1301 amino acids, UniProt Q22307). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
B lymphocyte-induced maturation protein 1 homolog (blmp-1, C. elegans) — B lymphocyte-induced maturation protein 1 homolog — nematode worm (Caenorhabditis elegans) protein (gene blmp-1, 817 amino acids, UniProt Q93560). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
CCAAT/enhancer-binding protein homolog 1 (cebp-1, C. elegans) — CCAAT/enhancer-binding protein homolog 1 — nematode worm (Caenorhabditis elegans) protein (gene cebp-1, 319 amino acids, UniProt Q18909). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Chromatin-remodeling complex ATPase chain isw-1 (isw-1, C. elegans) — Chromatin-remodeling complex ATPase chain isw-1 — nematode worm (Caenorhabditis elegans) protein (gene isw-1, 1009 amino acids, UniProt P41877). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
CREB-H transcription factor homolog let-607 (let-607, C. elegans) — CREB-H transcription factor homolog let-607 — nematode worm (Caenorhabditis elegans) protein (gene let-607, 690 amino acids, UniProt O44743). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Cyclin-C (cic-1, C. elegans) — Cyclin-C — nematode worm (Caenorhabditis elegans) protein (gene cic-1, 302 amino acids, UniProt Q9TYP2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Defective pharyngeal development protein 4 (pha-4, C. elegans) — Defective pharyngeal development protein 4 — nematode worm (Caenorhabditis elegans) protein (gene pha-4, 506 amino acids, UniProt Q17381). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Doublesex- and mab-3-related transcription factor dmd-3 (dmd-3, C. elegans) — Doublesex- and mab-3-related transcription factor dmd-3 — nematode worm (Caenorhabditis elegans) protein (gene dmd-3, 250 amino acids, UniProt Q9XWN9). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Doublesex- and mab-3-related transcription factor dmd-4 (dmd-4, C. elegans) — Doublesex- and mab-3-related transcription factor dmd-4 — nematode worm (Caenorhabditis elegans) protein (gene dmd-4, 260 amino acids, UniProt Q18248). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Egg-laying defective protein 27 (egl-27, C. elegans) — Egg-laying defective protein 27 — nematode worm (Caenorhabditis elegans) protein (gene egl-27, 1129 amino acids, UniProt Q09228). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
FLYWCH-type zinc finger-containing protein peb-1 (peb-1, C. elegans) — FLYWCH-type zinc finger-containing protein peb-1 — nematode worm (Caenorhabditis elegans) protein (gene peb-1, 443 amino acids, UniProt A0A5S9MMK5). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Forkhead box protein F (let-381, C. elegans) — Forkhead box protein F — nematode worm (Caenorhabditis elegans) protein (gene let-381, 362 amino acids, UniProt P91278). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Forkhead box protein O (daf-16, C. elegans) — Forkhead box protein O — nematode worm (Caenorhabditis elegans) protein (gene daf-16, 541 amino acids, UniProt O16850). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Helix-loop-helix protein 13 (hlh-13, C. elegans) — Helix-loop-helix protein 13 — nematode worm (Caenorhabditis elegans) protein (gene hlh-13, 147 amino acids, UniProt Q20561). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Histone acetyltransferase Tip60 homolog (mys-1, C. elegans) — Histone acetyltransferase Tip60 homolog — nematode worm (Caenorhabditis elegans) protein (gene mys-1, 458 amino acids, UniProt Q9TYU5). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Histone deacetylase 1 (hda-1, C. elegans) — Histone deacetylase 1 — nematode worm (Caenorhabditis elegans) protein (gene hda-1, 461 amino acids, UniProt O17695). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Histone-lysine N-methyltransferase mes-2 (mes-2, C. elegans) — Histone-lysine N-methyltransferase mes-2 — nematode worm (Caenorhabditis elegans) protein (gene mes-2, 773 amino acids, UniProt O17514). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Histone-lysine N-methyltransferase set-2 (set-2, C. elegans) — Histone-lysine N-methyltransferase set-2 — nematode worm (Caenorhabditis elegans) protein (gene set-2, 1507 amino acids, UniProt Q18221). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 11 (mdt-11, C. elegans) — Mediator of RNA polymerase II transcription subunit 11 — nematode worm (Caenorhabditis elegans) protein (gene mdt-11, 188 amino acids, UniProt Q9BI74). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 17 (mdt-17, C. elegans) — Mediator of RNA polymerase II transcription subunit 17 — nematode worm (Caenorhabditis elegans) protein (gene mdt-17, 667 amino acids, UniProt Q9NAL4). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 18 (mdt-18, C. elegans) — Mediator of RNA polymerase II transcription subunit 18 — nematode worm (Caenorhabditis elegans) protein (gene mdt-18, 232 amino acids, UniProt Q966M5). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 19 (mdt-19, C. elegans) — Mediator of RNA polymerase II transcription subunit 19 — nematode worm (Caenorhabditis elegans) protein (gene mdt-19, 199 amino acids, UniProt Q9N4F2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 20 (mdt-20, C. elegans) — Mediator of RNA polymerase II transcription subunit 20 — nematode worm (Caenorhabditis elegans) protein (gene mdt-20, 198 amino acids, UniProt Q9N5A1). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 23 (sur-2, C. elegans) — Mediator of RNA polymerase II transcription subunit 23 — nematode worm (Caenorhabditis elegans) protein (gene sur-2, 1587 amino acids, UniProt Q10669). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 6 (mdt-6, C. elegans) — Mediator of RNA polymerase II transcription subunit 6 — nematode worm (Caenorhabditis elegans) protein (gene mdt-6, 250 amino acids, UniProt Q9N337). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 7 (let-49, C. elegans) — Mediator of RNA polymerase II transcription subunit 7 — nematode worm (Caenorhabditis elegans) protein (gene let-49, 251 amino acids, UniProt Q95Q17). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nuclear hormone receptor family member daf-12 (daf-12, C. elegans) — Nuclear hormone receptor family member daf-12 — nematode worm (Caenorhabditis elegans) protein (gene daf-12, 753 amino acids, UniProt G5EFF5). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nuclear hormone receptor family member nhr-23 (nhr-23, C. elegans) — Nuclear hormone receptor family member nhr-23 — nematode worm (Caenorhabditis elegans) protein (gene nhr-23, 588 amino acids, UniProt P41828). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nuclear hormone receptor family member nhr-25 (nhr-25, C. elegans) — Nuclear hormone receptor family member nhr-25 — nematode worm (Caenorhabditis elegans) protein (gene nhr-25, 572 amino acids, UniProt Q19345). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nucleosome-remodeling factor subunit NURF301-like (nurf-1, C. elegans) — Nucleosome-remodeling factor subunit NURF301-like — nematode worm (Caenorhabditis elegans) protein (gene nurf-1, 2194 amino acids, UniProt Q6BER5). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Paired box protein 1 homolog (pax-1, C. elegans) — Paired box protein 1 homolog — nematode worm (Caenorhabditis elegans) protein (gene pax-1, 257 amino acids, UniProt Q21272). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Paired box protein 2 homolog (pax-2, C. elegans) — Paired box protein 2 homolog — nematode worm (Caenorhabditis elegans) protein (gene pax-2, 351 amino acids, UniProt Q21263). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Paired box protein 5 homolog (egl-38, C. elegans) — Paired box protein 5 homolog — nematode worm (Caenorhabditis elegans) protein (gene egl-38, 289 amino acids, UniProt G5ED14). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Period protein homolog lin-42 (lin-42, C. elegans) — Period protein homolog lin-42 — nematode worm (Caenorhabditis elegans) protein (gene lin-42, 597 amino acids, UniProt Q65ZG8). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Polycomb protein mes-3 (mes-3, C. elegans) — Polycomb protein mes-3 — nematode worm (Caenorhabditis elegans) protein (gene mes-3, 754 amino acids, UniProt Q10665). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Polycomb protein mes-6 (mes-6, C. elegans) — Polycomb protein mes-6 — nematode worm (Caenorhabditis elegans) protein (gene mes-6, 459 amino acids, UniProt Q9GYS1). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Probable histone-binding protein lin-53 (lin-53, C. elegans) — Probable histone-binding protein lin-53 — nematode worm (Caenorhabditis elegans) protein (gene lin-53, 417 amino acids, UniProt P90916). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Probable histone-binding protein rba-1 (rba-1, C. elegans) — Probable histone-binding protein rba-1 — nematode worm (Caenorhabditis elegans) protein (gene rba-1, 412 amino acids, UniProt P90917). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein lin-14 (lin-14, C. elegans) — Protein lin-14 — nematode worm (Caenorhabditis elegans) protein (gene lin-14, 539 amino acids, UniProt Q21446). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein lin-31 (lin-31, C. elegans) — Protein lin-31 — nematode worm (Caenorhabditis elegans) protein (gene lin-31, 237 amino acids, UniProt P34683). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein lin-9 (lin-9, C. elegans) — Protein lin-9 — nematode worm (Caenorhabditis elegans) protein (gene lin-9, 644 amino acids, UniProt P30630). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein odd-skipped-related 1 (odd-1, C. elegans) — Protein odd-skipped-related 1 — nematode worm (Caenorhabditis elegans) protein (gene odd-1, 242 amino acids, UniProt P41995). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein odd-skipped-related 2 (odd-2, C. elegans) — Protein odd-skipped-related 2 — nematode worm (Caenorhabditis elegans) protein (gene odd-2, 254 amino acids, UniProt Q9N5X6). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein phosphatase eya-1 (eya-1, C. elegans) — Protein phosphatase eya-1 — nematode worm (Caenorhabditis elegans) protein (gene eya-1, 503 amino acids, UniProt O17670). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein skinhead-1 (skn-1, C. elegans) — Protein skinhead-1 — nematode worm (Caenorhabditis elegans) protein (gene skn-1, 623 amino acids, UniProt P34707). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Putative T-box protein 30/42 (tbx-30; tbx-42, C. elegans) — Putative T-box protein 30/42 — nematode worm (Caenorhabditis elegans) protein (gene tbx-30; tbx-42, 308 amino acids, UniProt Q9N2K7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Runt-related transcription factor rnt-1 (rnt-1, C. elegans) — Runt-related transcription factor rnt-1 — nematode worm (Caenorhabditis elegans) protein (gene rnt-1, 301 amino acids, UniProt G5EFQ5). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Serine/threonine-protein kinase tousled-like 1 (tlk-1, C. elegans) — Serine/threonine-protein kinase tousled-like 1 — nematode worm (Caenorhabditis elegans) protein (gene tlk-1, 965 amino acids, UniProt P34314). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Signal transducer and activator of transcription 1 (sta-1, C. elegans) — Signal transducer and activator of transcription 1 — nematode worm (Caenorhabditis elegans) protein (gene sta-1, 706 amino acids, UniProt Q9NAD6). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Signal transducer and activator of transcription b (sta-2, C. elegans) — Signal transducer and activator of transcription b — nematode worm (Caenorhabditis elegans) protein (gene sta-2, 567 amino acids, UniProt Q20977). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
T-box protein 12 (mab-9, C. elegans) — T-box protein 12 — nematode worm (Caenorhabditis elegans) protein (gene mab-9, 346 amino acids, UniProt P90971). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
T-box protein 2 (tbx-2, C. elegans) — T-box protein 2 — nematode worm (Caenorhabditis elegans) protein (gene tbx-2, 423 amino acids, UniProt Q19691). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
T-box transcription factor mls-1 (mls-1, C. elegans) — T-box transcription factor mls-1 — nematode worm (Caenorhabditis elegans) protein (gene mls-1, 252 amino acids, UniProt O17212). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
T-box transcription factor tbx-8 (tbx-8, C. elegans) — T-box transcription factor tbx-8 — nematode worm (Caenorhabditis elegans) protein (gene tbx-8, 315 amino acids, UniProt Q22292). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
T-box transcription factor tbx-9 (tbx-9, C. elegans) — T-box transcription factor tbx-9 — nematode worm (Caenorhabditis elegans) protein (gene tbx-9, 292 amino acids, UniProt Q22289). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor aptf-2 (aptf-2, C. elegans) — Transcription factor aptf-2 — nematode worm (Caenorhabditis elegans) protein (gene aptf-2, 367 amino acids, UniProt G2HK15). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor aptf-4 (aptf-4, C. elegans) — Transcription factor aptf-4 — nematode worm (Caenorhabditis elegans) protein (gene aptf-4, 486 amino acids, UniProt Q19863). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor efl-3 (efl-3, C. elegans) — Transcription factor efl-3 — nematode worm (Caenorhabditis elegans) protein (gene efl-3, 600 amino acids, UniProt Q20619). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor elt-1 (elt-1, C. elegans) — Transcription factor elt-1 — nematode worm (Caenorhabditis elegans) protein (gene elt-1, 416 amino acids, UniProt P28515). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor unc-3 (unc-3, C. elegans) — Transcription factor unc-3 — nematode worm (Caenorhabditis elegans) protein (gene unc-3, 491 amino acids, UniProt Q93705). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor unc-37 (unc-37, C. elegans) — Transcription factor unc-37 — nematode worm (Caenorhabditis elegans) protein (gene unc-37, 612 amino acids, UniProt O02482). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Twist-related protein (hlh-8, C. elegans) — Twist-related protein — nematode worm (Caenorhabditis elegans) protein (gene hlh-8, 178 amino acids, UniProt Q11094). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
WD repeat-containing protein wdr-5.1 (wdr-5.1, C. elegans) — WD repeat-containing protein wdr-5.1 — nematode worm (Caenorhabditis elegans) protein (gene wdr-5.1, 376 amino acids, UniProt Q17963). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Zinc finger BED domain-containing protein 3 (bed-3, C. elegans) — Zinc finger BED domain-containing protein 3 — nematode worm (Caenorhabditis elegans) protein (gene bed-3, 599 amino acids, UniProt Q19787). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Zinc finger protein sdc-1 (sdc-1, C. elegans) — Zinc finger protein sdc-1 — nematode worm (Caenorhabditis elegans) protein (gene sdc-1, 1201 amino acids, UniProt P24349). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).