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Receptors (GPCRs & nuclear) (PDB): 72 3D models

DNA, RNA, nucleic-acid drugs, gene editing, proteins and 300+ real PDB structures (real sizes 1–100 nm). Each one is a ready-made 3D model you can turn, recolour and place in a figure — open BioDioRama and type its name in the Library search.

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A homotrimeric GPCR architecture of the human cytomegalovirus (UL78)… — A homotrimeric gpcr architecture of the human cytomegalovirus (ul78) revealed by cryo-em — Cryo-EM structure, 2024 (PDB 8Z1E), downloaded from the RCSB Protein Data Bank.
Orphan GPCR — Cryo-em structure of an orphan gpcr — Cryo-EM structure, 2024 (PDB 8IRJ), downloaded from the RCSB Protein Data Bank.
PF 06882961 bound to the glucagon-like peptide-1 receptor… — Pf 06882961 bound to the glucagon-like peptide-1 receptor (glp-1r):gs complex — Cryo-EM structure, 2021 (PDB 7LCJ), downloaded from the RCSB Protein Data Bank.
PF 06882961 bound to the glucagon-like peptide-1 receptor (GLP-1R) — Pf 06882961 bound to the glucagon-like peptide-1 receptor (glp-1r) — Cryo-EM structure, 2021 (PDB 7LCK), downloaded from the RCSB Protein Data Bank.
Human apo GPR156 — Cryo-em structure of human apo gpr156 — Cryo-EM structure, 2025 (PDB 8YJP), downloaded from the RCSB Protein Data Bank.
Human glucagon receptor (GCGR) in ligand free state resolved via the… — Cryo-em structure of the human glucagon receptor (gcgr) in ligand free state resolved via the fusion/crosslinking strategy — Cryo-EM structure, 2026 (PDB 9M7G), downloaded from the RCSB Protein Data Bank.
Receptor of hGPR68-Gs complex in pH6.0 — Cryo-em structure of the receptor of hgpr68-gs complex in ph6.0 — Cryo-EM structure, 2025 (PDB 8Z3O), downloaded from the RCSB Protein Data Bank.
Turkey BETA1 adrenergic receptor with stabilising mutations and… (2YCY) — Turkey beta1 adrenergic receptor with stabilising mutations and bound antagonist cyanopindolol — X-ray structure, 2011 (PDB 2YCY), downloaded from the RCSB Protein Data Bank.
Turkey BETA1 adrenergic receptor with stabilising mutations and… (2YCX) — Turkey beta1 adrenergic receptor with stabilising mutations and bound antagonist cyanopindolol — X-ray structure, 2011 (PDB 2YCX), downloaded from the RCSB Protein Data Bank.
Turkey BETA1 adrenergic receptor with stabilising mutations and… (2VT4) — Turkey beta1 adrenergic receptor with stabilising mutations and bound cyanopindolol — X-ray structure, 2008 (PDB 2VT4), downloaded from the RCSB Protein Data Bank.
Turkey BETA1 adrenergic receptor with stabilising mutations and… (2Y04) — Turkey beta1 adrenergic receptor with stabilising mutations and bound partial agonist salbutamol — X-ray structure, 2011 (PDB 2Y04), downloaded from the RCSB Protein Data Bank.
Turkey BETA1 adrenergic receptor with stabilising mutations and… (2Y02) — Turkey beta1 adrenergic receptor with stabilising mutations and bound agonist carmoterol — X-ray structure, 2011 (PDB 2Y02), downloaded from the RCSB Protein Data Bank.
Turkey BETA1 adrenergic receptor with stabilising mutations and… (2Y01) — Turkey beta1 adrenergic receptor with stabilising mutations and bound partial agonist dobutamine (crystal dob102) — X-ray structure, 2011 (PDB 2Y01), downloaded from the RCSB Protein Data Bank.
Turkey BETA1 adrenergic receptor with stabilising mutations and… (2Y00) — Turkey beta1 adrenergic receptor with stabilising mutations and bound partial agonist dobutamine (crystal dob92) — X-ray structure, 2011 (PDB 2Y00), downloaded from the RCSB Protein Data Bank.
Active delta opioid receptor — Crystal structure of the active delta opioid receptor in complex with the small molecule agonist dpi-287 — X-ray structure, 2019 (PDB 6PT3), downloaded from the RCSB Protein Data Bank.
Active delta opioid receptor in complex with the peptide agonist KGCHM07 — Crystal structure of the active delta opioid receptor in complex with the peptide agonist kgchm07 — X-ray structure, 2019 (PDB 6PT2), downloaded from the RCSB Protein Data Bank.
Inactive mu opioid receptor bound to Nb6, naloxone and NAM — Inactive mu opioid receptor bound to nb6, naloxone and nam — Cryo-EM structure, 2024 (PDB 9BJK), downloaded from the RCSB Protein Data Bank.
1.8 A Structure of the human delta opioid 7TM receptor (PSI… — 1.8 a structure of the human delta opioid 7tm receptor (psi community target) — X-ray structure, 2013 (PDB 4N6H), downloaded from the RCSB Protein Data Bank.
Synchrotron structure of the human delta opioid receptor — Synchrotron structure of the human delta opioid receptor in complex with a bifunctional peptide (psi community target) — X-ray structure, 2015 (PDB 4RWA), downloaded from the RCSB Protein Data Bank.
XFEL structure of the human delta opioid receptor — Xfel structure of the human delta opioid receptor in complex with a bifunctional peptide — X-ray structure, 2015 (PDB 4RWD), downloaded from the RCSB Protein Data Bank.
Molecular mechanism of biased signaling at the kappa opioid receptor — Molecular mechanism of biased signaling at the kappa opioid receptor — X-ray structure, 2023 (PDB 7YIT), downloaded from the RCSB Protein Data Bank.
Nanobody-Enabled Monitoring of Kappa Opioid Receptor States — Nanobody-enabled monitoring of kappa opioid receptor states — X-ray structure, 2020 (PDB 6VI4), downloaded from the RCSB Protein Data Bank.
Delta opioid receptor bound to naltrindole — Structure of the delta opioid receptor bound to naltrindole — X-ray structure, 2012 (PDB 4EJ4), downloaded from the RCSB Protein Data Bank.
Ligand-Binding Domains of the T.castaneum (Coleoptera) Heterodimer… — Crystal structure of the ligand-binding domains of the t.castaneum (coleoptera) heterodimer ecrusp bound to ponasterone a — X-ray structure, 2007 (PDB 2NXX), downloaded from the RCSB Protein Data Bank.
Structural and functional insights into the ligand binding domain of… — Structural and functional insights into the ligand binding domain of a non-duplicated rxr from the invertebrate chordate amphioxus — X-ray structure, 2008 (PDB 3EYB), downloaded from the RCSB Protein Data Bank.
Ligand binding domain of polyandrocarpa misakiensis rxr in tetramer… — Crystal structure of the ligand binding domain of polyandrocarpa misakiensis rxr in tetramer in absence of ligand — X-ray structure, 2008 (PDB 2Q60), downloaded from the RCSB Protein Data Bank.
Pacific Oyster Estrogen Receptor Ligand Binding Domain — Crystal structure of the pacific oyster estrogen receptor ligand binding domain — X-ray structure, 2014 (PDB 4N1Y), downloaded from the RCSB Protein Data Bank.
S810L mutant mineralocorticoid receptor associated with SC9420 — Crystal structure of the s810l mutant mineralocorticoid receptor associated with sc9420 — X-ray structure, 2007 (PDB 2OAX), downloaded from the RCSB Protein Data Bank.
Human Retinoic acid receptor RXR-gamma ligand-binding domain — Human retinoic acid receptor rxr-gamma ligand-binding domain — X-ray structure, 2006 (PDB 2GL8), downloaded from the RCSB Protein Data Bank.
Ligand binding domain of the ultraspiracle protein usp, the ortholog… — Crystal structure of the ligand binding domain of the ultraspiracle protein usp, the ortholog of rxrs in insects — X-ray structure, 2001 (PDB 1G2N), downloaded from the RCSB Protein Data Bank.
Estrogen Related Receptor-3 (ERR-gamma) ligand binding domaind with… — Crystal structure of estrogen related receptor-3 (err-gamma) ligand binding domaind with tamoxifen analog gsk5182 — X-ray structure, 2006 (PDB 2EWP), downloaded from the RCSB Protein Data Bank.
Transcription factor DksA from E. coli — Crystal structure of transcription factor dksa from e. coli — X-ray structure, 2004 (PDB 1TJL), downloaded from the RCSB Protein Data Bank.
DNA-free Glucocorticoid Receptor DNA Binding Domain — Crystal structure of the dna-free glucocorticoid receptor dna binding domain — X-ray structure, 2018 (PDB 6CFN), downloaded from the RCSB Protein Data Bank.
Glucocorticoid receptor bound to high cooperativity monomer sequence — Glucocorticoid receptor bound to high cooperativity monomer sequence — X-ray structure, 2018 (PDB 6BSE), downloaded from the RCSB Protein Data Bank.
Type II thymidine kinase with bound dTTP — Structure of a type ii thymidine kinase with bound dttp — X-ray structure, 2005 (PDB 1W4R), downloaded from the RCSB Protein Data Bank.
Mutation of Thr163 to Ser in Human Thymidine Kinase Shifts the… — Mutation of thr163 to ser in human thymidine kinase shifts the specificity from thymidine towards the nucleoside analogue azidothymidine — X-ray structure, 2009 (PDB 2WVJ), downloaded from the RCSB Protein Data Bank.
Resurrected Ancestral Glucocorticoid Receptor 1 in complex with DOC — Crystal structure of the resurrected ancestral glucocorticoid receptor 1 in complex with doc — X-ray structure, 2011 (PDB 3RY9), downloaded from the RCSB Protein Data Bank.
Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain (9N2J) — Crystal structure of melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with estradiol — X-ray structure, 2026 (PDB 9N2J), downloaded from the RCSB Protein Data Bank.
Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain (9N28) — Crystal structure of melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with estradiol and d22 13mer — X-ray structure, 2026 (PDB 9N28), downloaded from the RCSB Protein Data Bank.
Estrogen Receptor in complex with proline-flanked LXXLL peptides (4J24) — Estrogen receptor in complex with proline-flanked lxxll peptides — X-ray structure, 2013 (PDB 4J24), downloaded from the RCSB Protein Data Bank.
ER beta bound to Estradiol — Crystal structure of er beta bound to estradiol — X-ray structure, 2017 (PDB 5TOA), downloaded from the RCSB Protein Data Bank.
Estrogen Receptor alpha from Melanotaenia fluviatilis — Crystal structure of estrogen receptor alpha from melanotaenia fluviatilis bound to estradiol and human src2 peptide — X-ray structure, 2025 (PDB 9D8Q), downloaded from the RCSB Protein Data Bank.
KSHV ORF74 Apo Dimer at 2.8A — Cryo-em structure of kshv orf74 apo dimer at 2.8a — Cryo-EM structure, 2025 (PDB 8W1A), downloaded from the RCSB Protein Data Bank.
Ligand-binding domains of the heterodimer EcR/USP — Crystal structure of the ligand-binding domains of the heterodimer ecr/usp bound to the synthetic agonist byi09181 — X-ray structure, 2021 (PDB 7BJV), downloaded from the RCSB Protein Data Bank.
Green-light absorbing proteorhodopsin — Cryo-em structure of the green-light absorbing proteorhodopsin — Cryo-EM structure, 2021 (PDB 7B03), downloaded from the RCSB Protein Data Bank.
Human GR (418-507) in complex with monomeric DNA binding site — Human gr (418-507) in complex with monomeric dna binding site — X-ray structure, 2018 (PDB 6BSF), downloaded from the RCSB Protein Data Bank.
Leishmania major Thymidine Kinase in complex with dTTP — Leishmania major thymidine kinase in complex with dttp — X-ray structure, 2015 (PDB 4UXJ), downloaded from the RCSB Protein Data Bank.
Oligomeic Turkey Beta1-Adrenergic G Protein-Coupled Receptor — Oligomeic turkey beta1-adrenergic g protein-coupled receptor — X-ray structure, 2013 (PDB 4GPO), downloaded from the RCSB Protein Data Bank.
Turkey BETA1 adrenergic receptor with stabilising mutations and… (2YCW) — Turkey beta1 adrenergic receptor with stabilising mutations and bound antagonist carazolol — X-ray structure, 2011 (PDB 2YCW), downloaded from the RCSB Protein Data Bank.
Human Thymidine Kinase 1 — Crystal structure of human thymidine kinase 1 — X-ray structure, 2004 (PDB 1XBT), downloaded from the RCSB Protein Data Bank.
Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain (9N25) — Crystal structure of melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with bisphenol z — X-ray structure, 2026 (PDB 9N25), downloaded from the RCSB Protein Data Bank.
Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain (9N0C) — Crystal structure of melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with bisphenol bpbp — X-ray structure, 2026 (PDB 9N0C), downloaded from the RCSB Protein Data Bank.
PII signaling protein GlnZ from Azospirillum brasilense — Structure of pii signaling protein glnz from azospirillum brasilense in complex with adenosine triphosphate — X-ray structure, 2014 (PDB 4CO4), downloaded from the RCSB Protein Data Bank.
Plasmodium falciparum HPPK-DHPS wild type — Crystal structure of plasmodium falciparum hppk-dhps wild type — X-ray structure, 2020 (PDB 6JWQ), downloaded from the RCSB Protein Data Bank.
Plasmodium falciparum HPPK-DHPS S436F/A437G/A613T triple mutant with… (6JWT) — Crystal structure of plasmodium falciparum hppk-dhps s436f/a437g/a613t triple mutant with pteroate — X-ray structure, 2020 (PDB 6JWT), downloaded from the RCSB Protein Data Bank.
Ribose-phosphate Pyrophosphokinase from Legionella pneumophila — Crystal structure of ribose-phosphate pyrophosphokinase from legionella pneumophila with bound amp, adp, and ribose-5-phosphate — X-ray structure, 2019 (PDB 6NFE), downloaded from the RCSB Protein Data Bank.
Pantothenate synthetase complexed with AMP and beta-alanine — Crystal structure of a pantothenate synthetase complexed with amp and beta-alanine — X-ray structure, 2006 (PDB 2A86), downloaded from the RCSB Protein Data Bank.
CXCR2 bound to CXCL5 (Ligand-receptor focused map) — Structure of cxcr2 bound to cxcl5 (ligand-receptor focused map) — Cryo-EM structure, 2025 (PDB 8XWS), downloaded from the RCSB Protein Data Bank.
Human CC chemokine receptor type 9 (CCR9) in complex with vercirnon — Crystal structure of the human cc chemokine receptor type 9 (ccr9) in complex with vercirnon — X-ray structure, 2016 (PDB 5LWE), downloaded from the RCSB Protein Data Bank.
CXCR4 and viral chemokine antagonist vMIP-II complex (PSI Community… — Crystal structure of cxcr4 and viral chemokine antagonist vmip-ii complex (psi community target) — X-ray structure, 2015 (PDB 4RWS), downloaded from the RCSB Protein Data Bank.
CXCR2 bound to CXCL1 (Ligand-receptor focused map) — Structure of cxcr2 bound to cxcl1 (ligand-receptor focused map) — Cryo-EM structure, 2025 (PDB 8XWA), downloaded from the RCSB Protein Data Bank.
Thymus and activation-regulated chemokine — High resolution crystal structures of thymus and activation-regulated chemokine — X-ray structure, 2003 (PDB 1NR2), downloaded from the RCSB Protein Data Bank.
Human chemokine CCL16 — Structure of human chemokine ccl16 — X-ray structure, 2018 (PDB 5LTL), downloaded from the RCSB Protein Data Bank.
Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain (9N0A) — Crystal structure of melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with bisphenol ap — X-ray structure, 2026 (PDB 9N0A), downloaded from the RCSB Protein Data Bank.
CXCR2 bound to CXCL2 (Ligand-receptor focused map) — Structure of cxcr2 bound to cxcl2 (ligand-receptor focused map) — Cryo-EM structure, 2025 (PDB 8XVU), downloaded from the RCSB Protein Data Bank.
Plasmodium falciparum HPPK-DHPS S436F/A437G/A613T triple mutant with… (6JWW) — Crystal structure of plasmodium falciparum hppk-dhps s436f/a437g/a613t triple mutant with stz-dhp — X-ray structure, 2020 (PDB 6JWW), downloaded from the RCSB Protein Data Bank.
Estrogen Receptor in complex with proline-flanked LXXLL peptides (4J26) — Estrogen receptor in complex with proline-flanked lxxll peptides — X-ray structure, 2013 (PDB 4J26), downloaded from the RCSB Protein Data Bank.
Protein MJ1225 from Methanocaldococcus jannaschii, a putative… — Crystal structure of protein mj1225 from methanocaldococcus jannaschii, a putative archaeal homolog of g-ampk. — X-ray structure, 2010 (PDB 3LFZ), downloaded from the RCSB Protein Data Bank.
Adenosine deaminase from Plasmodium vivax in complex with adenosine — Crystal structure of adenosine deaminase from plasmodium vivax in complex with adenosine — X-ray structure, 2007 (PDB 2PGF), downloaded from the RCSB Protein Data Bank.
PnrA from Treponema pallidum complexed with adenosine — Pnra from treponema pallidum complexed with adenosine. — X-ray structure, 2006 (PDB 2FQY), downloaded from the RCSB Protein Data Bank.
Viral Macrophage Inflammatory Protein-II (2FHT) — Crystal structure of viral macrophage inflammatory protein-ii — X-ray structure, 2006 (PDB 2FHT), downloaded from the RCSB Protein Data Bank.
Viral macrophage inflammatory protein-ii (1CM9) — Crystal structure of viral macrophage inflammatory protein-ii — X-ray structure, 1999 (PDB 1CM9), downloaded from the RCSB Protein Data Bank.