Library › DNA & Proteins › Zebrafish proteins (AlphaFold) · Neural development

Zebrafish proteins (AlphaFold) · Neural development: 28 3D models

DNA, RNA, nucleic-acid drugs, gene editing, proteins and 300+ real PDB structures (real sizes 1–100 nm). Each one is a ready-made 3D model you can turn, recolour and place in a figure — open BioDiorama and type its name in the Library search.

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Achaete-scute homolog 1a (ascl1a, zebrafish) — Achaete-scute homolog 1a — zebrafish (Danio rerio) protein (gene ascl1a, 196 amino acids, UniProt Q90259). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Achaete-scute homolog 1b (ascl1b, zebrafish) — Achaete-scute homolog 1b — zebrafish (Danio rerio) protein (gene ascl1b, 195 amino acids, UniProt Q90260). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
BTB/POZ domain-containing protein 6-A (btbd6a, zebrafish) — BTB/POZ domain-containing protein 6-A — zebrafish (Danio rerio) protein (gene btbd6a, 540 amino acids, UniProt A9JRD8). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
BTB/POZ domain-containing protein 6-B (btbd6b, zebrafish) — BTB/POZ domain-containing protein 6-B — zebrafish (Danio rerio) protein (gene btbd6b, 482 amino acids, UniProt Q5TZE1). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
E3 ubiquitin-protein ligase makorin-2 (mkrn2, zebrafish) — E3 ubiquitin-protein ligase makorin-2 — zebrafish (Danio rerio) protein (gene mkrn2, 414 amino acids, UniProt Q9DFG8). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Ephrin-A2 (efna2, zebrafish) — Ephrin-A2 — zebrafish (Danio rerio) protein (gene efna2, 195 amino acids, UniProt P79727). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Ephrin-A5b (efna5b, zebrafish) — Ephrin-A5b — zebrafish (Danio rerio) protein (gene efna5b, 228 amino acids, UniProt P79728). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Ephrin-B2a (efnb2a, zebrafish) — Ephrin-B2a — zebrafish (Danio rerio) protein (gene efnb2a, 332 amino acids, UniProt O73874). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Fibroblast growth factor 8b (fgf8b, zebrafish) — Fibroblast growth factor 8b — zebrafish (Danio rerio) protein (gene fgf8b, 212 amino acids, UniProt Q805B2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
G protein-coupled estrogen receptor 1 (gper1, zebrafish) — G protein-coupled estrogen receptor 1 — zebrafish (Danio rerio) protein (gene gper1, 353 amino acids, UniProt B3G515). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Insulinoma-associated protein 1a (insm1a, zebrafish) — Insulinoma-associated protein 1a — zebrafish (Danio rerio) protein (gene insm1a, 383 amino acids, UniProt Q6P0F9). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Insulinoma-associated protein 1b (insm1b, zebrafish) — Insulinoma-associated protein 1b — zebrafish (Danio rerio) protein (gene insm1b, 453 amino acids, UniProt Q7T3H2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Lissencephaly-1 homolog A (pafah1b1a, zebrafish) — Lissencephaly-1 homolog A — zebrafish (Danio rerio) protein (gene pafah1b1a, 410 amino acids, UniProt Q7T394). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Lissencephaly-1 homolog B (pafah1b1b, zebrafish) — Lissencephaly-1 homolog B — zebrafish (Danio rerio) protein (gene pafah1b1b, 410 amino acids, UniProt Q803D2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 24 (med24, zebrafish) — Mediator of RNA polymerase II transcription subunit 24 — zebrafish (Danio rerio) protein (gene med24, 989 amino acids, UniProt Q2PW47). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Neural cell adhesion molecule L1.1 (nadl1.1, zebrafish) — Neural cell adhesion molecule L1.1 — zebrafish (Danio rerio) protein (gene nadl1.1, 1197 amino acids, UniProt Q90478). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Neural cell adhesion molecule L1.2 (nadl1.2, zebrafish) — Neural cell adhesion molecule L1.2 — zebrafish (Danio rerio) protein (gene nadl1.2, 216 amino acids, UniProt Q90479). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Neurogenic differentiation factor 6-A (neurod6a, zebrafish) — Neurogenic differentiation factor 6-A — zebrafish (Danio rerio) protein (gene neurod6a, 327 amino acids, UniProt Q6NYU3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Neurogenic differentiation factor 6-B (neurod6b, zebrafish) — Neurogenic differentiation factor 6-B — zebrafish (Danio rerio) protein (gene neurod6b, 317 amino acids, UniProt Q9W6C7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Neuropilin-1a (nrp1a, zebrafish) — Neuropilin-1a — zebrafish (Danio rerio) protein (gene nrp1a, 923 amino acids, UniProt Q8QFX6). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Paired box protein Pax-2a (pax2a, zebrafish) — Paired box protein Pax-2a — zebrafish (Danio rerio) protein (gene pax2a, 410 amino acids, UniProt Q90268). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phosphatase and actin regulator 4A (phactr4a, zebrafish) — Phosphatase and actin regulator 4A — zebrafish (Danio rerio) protein (gene phactr4a, 725 amino acids, UniProt F1QIC4). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Phosphatase and actin regulator 4B (phactr4b, zebrafish) — Phosphatase and actin regulator 4B — zebrafish (Danio rerio) protein (gene phactr4b, 754 amino acids, UniProt Q6PEI3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein LZIC (lzic, zebrafish) — Protein LZIC — zebrafish (Danio rerio) protein (gene lzic, 190 amino acids, UniProt Q6DHH7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Semaphorin-3aa (sema3aa, zebrafish) — Semaphorin-3aa — zebrafish (Danio rerio) protein (gene sema3aa, 860 amino acids, UniProt Q9W7J1). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Semaphorin-3ab (sema3ab, zebrafish) — Semaphorin-3ab — zebrafish (Danio rerio) protein (gene sema3ab, 778 amino acids, UniProt Q9W686). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Single-minded homolog 1-A (sim1a, zebrafish) — Single-minded homolog 1-A — zebrafish (Danio rerio) protein (gene sim1a, 745 amino acids, UniProt Q98SJ5). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor Sox-19a (sox19a, zebrafish) — Transcription factor Sox-19a — zebrafish (Danio rerio) protein (gene sox19a, 297 amino acids, UniProt P47792). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).