Library › DNA & Proteins › Zebrafish proteins (AlphaFold) · Transcription factors

Zebrafish proteins (AlphaFold) · Transcription factors: 24 3D models

DNA, RNA, nucleic-acid drugs, gene editing, proteins and 300+ real PDB structures (real sizes 1–100 nm). Each one is a ready-made 3D model you can turn, recolour and place in a figure — open BioDiorama and type its name in the Library search.

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B-cell CLL/lymphoma 9-like protein (bcl9l, zebrafish) — B-cell CLL/lymphoma 9-like protein — zebrafish (Danio rerio) protein (gene bcl9l, 1530 amino acids, UniProt Q67FY3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Double-strand-break repair protein rad21 homolog A (rad21a, zebrafish) — Double-strand-break repair protein rad21 homolog A — zebrafish (Danio rerio) protein (gene rad21a, 643 amino acids, UniProt Q6TEL1). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Forkhead box protein I3-A (foxi3a, zebrafish) — Forkhead box protein I3-A — zebrafish (Danio rerio) protein (gene foxi3a, 353 amino acids, UniProt A3KNJ3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Forkhead box protein I3-B (foxi3b, zebrafish) — Forkhead box protein I3-B — zebrafish (Danio rerio) protein (gene foxi3b, 383 amino acids, UniProt Q7T1C0). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 12 (med12, zebrafish) — Mediator of RNA polymerase II transcription subunit 12 — zebrafish (Danio rerio) protein (gene med12, 2173 amino acids, UniProt Q2QCI8). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mediator of RNA polymerase II transcription subunit 27 (med27, zebrafish) — Mediator of RNA polymerase II transcription subunit 27 — zebrafish (Danio rerio) protein (gene med27, 311 amino acids, UniProt Q6PFL0). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Mitogen-activated protein kinase 14A (mapk14a, zebrafish) — Mitogen-activated protein kinase 14A — zebrafish (Danio rerio) protein (gene mapk14a, 361 amino acids, UniProt Q9DGE2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nipped-B-like protein A (nipbla, zebrafish) — Nipped-B-like protein A — zebrafish (Danio rerio) protein (gene nipbla, 2381 amino acids, UniProt F5HSE3). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nuclear receptor coactivator 2 (ncoa2, zebrafish) — Nuclear receptor coactivator 2 — zebrafish (Danio rerio) protein (gene ncoa2, 1505 amino acids, UniProt Q98TW1). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nuclear receptor ROR-alpha A (roraa, zebrafish) — Nuclear receptor ROR-alpha A — zebrafish (Danio rerio) protein (gene roraa, 468 amino acids, UniProt F1QLY4). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nuclear receptor ROR-alpha B (rorab, zebrafish) — Nuclear receptor ROR-alpha B — zebrafish (Danio rerio) protein (gene rorab, 474 amino acids, UniProt F1QJF4). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Nuclear respiratory factor 1 (nrf1, zebrafish) — Nuclear respiratory factor 1 — zebrafish (Danio rerio) protein (gene nrf1, 514 amino acids, UniProt Q90X44). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein Jumonji (jarid2b, zebrafish) — Protein Jumonji — zebrafish (Danio rerio) protein (gene jarid2b, 1319 amino acids, UniProt Q1LVC2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein odd-skipped-related 1 (osr1, zebrafish) — Protein odd-skipped-related 1 — zebrafish (Danio rerio) protein (gene osr1, 264 amino acids, UniProt Q5XJQ7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Protein odd-skipped-related 2 (osr2, zebrafish) — Protein odd-skipped-related 2 — zebrafish (Danio rerio) protein (gene osr2, 238 amino acids, UniProt Q567J8). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
SMAD family member 1 (smad1, zebrafish) — SMAD family member 1 — zebrafish (Danio rerio) protein (gene smad1, 472 amino acids, UniProt Q9I8V2). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
SMAD family member 2 (smad2, zebrafish) — SMAD family member 2 — zebrafish (Danio rerio) protein (gene smad2, 468 amino acids, UniProt Q9I9P9). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
SMAD family member 5 (smad5, zebrafish) — SMAD family member 5 — zebrafish (Danio rerio) protein (gene smad5, 464 amino acids, UniProt Q9W7E7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
T-box transcription factor TBX2b (tbx2b, zebrafish) — T-box transcription factor TBX2b — zebrafish (Danio rerio) protein (gene tbx2b, 687 amino acids, UniProt Q7ZTU9). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
T-box transcription factor TBX5-A (tbx5a, zebrafish) — T-box transcription factor TBX5-A — zebrafish (Danio rerio) protein (gene tbx5a, 492 amino acids, UniProt Q9IAK8). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
TATA box-binding protein-like 1 (tbpl1, zebrafish) — TATA box-binding protein-like 1 — zebrafish (Danio rerio) protein (gene tbpl1, 186 amino acids, UniProt Q5U385). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Thyroid hormone receptor alpha-A (thraa, zebrafish) — Thyroid hormone receptor alpha-A — zebrafish (Danio rerio) protein (gene thraa, 427 amino acids, UniProt Q98867). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor COE2 (coe2, zebrafish) — Transcription factor COE2 — zebrafish (Danio rerio) protein (gene coe2, 579 amino acids, UniProt O93375). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).
Transcription factor Sox-19b (sox19b, zebrafish) — Transcription factor Sox-19b — zebrafish (Danio rerio) protein (gene sox19b, 292 amino acids, UniProt Q9DDD7). AlphaFold-predicted 3D structure; by default coloured by model confidence (blue = very high, orange = very low, typical of disordered regions).