Library › Molecules › Nucleic-acid chemistry

Nucleic-acid chemistry: 25 3D models

Water, gases, sugars, nucleotides, amino acids, ions (real sizes 0.1–1 nm). Each one is a ready-made 3D model you can turn, recolour and place in a figure — open BioDioRama and type its name in the Library search.

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Pseudouridine (Ψ) — The most common RNA modification; reduces immune activation by mRNA. C9H12N2O6, 244.2 g/mol. Real 3D structure from PubChem.
N1-Methylpseudouridine (m1Ψ) — Modified nucleoside in the COVID-19 mRNA vaccines; lowers innate immune sensing (Nobel Prize 2023). C10H14N2O6, 258.23 g/mol. Real 3D structure from PubChem.
5-methylcytidine — C10H15N3O5, 257.24 g/mol. Real 3D structure from PubChem.
2'-O-methyladenosine — C11H15N5O4, 281.27 g/mol. Real 3D structure from PubChem.
2'-fluoro-2'-deoxyuridine — C9H11FN2O5, 246.19 g/mol. Real 3D structure from PubChem.
7-Methylguanosine (m7G, cap) — The m7G of the mRNA 5′ cap. C11H16N5O5+, 298.28 g/mol. Real 3D structure from PubChem.
N6-Methyladenosine (m6A) — C11H15N5O4, 281.27 g/mol. Real 3D structure from PubChem.
Inosine — C10H12N4O5, 268.23 g/mol. Real 3D structure from PubChem.
5-methyluridine — C10H14N2O6, 258.23 g/mol. Real 3D structure from PubChem.
2-aminopurine — C5H5N5, 135.13 g/mol. Real 3D structure from PubChem.
BrdU — C9H11BrN2O5, 307.1 g/mol. Real 3D structure from PubChem.
EdU — C11H12N2O5, 252.22 g/mol. Real 3D structure from PubChem.
dATP — C10H16N5O12P3, 491.18 g/mol. Real 3D structure from PubChem.
dCTP — C9H16N3O13P3, 467.16 g/mol. Real 3D structure from PubChem.
dGTP — C10H16N5O13P3, 507.18 g/mol. Real 3D structure from PubChem.
dTTP — C10H17N2O14P3, 482.17 g/mol. Real 3D structure from PubChem.
UTP — C9H15N2O15P3, 484.14 g/mol. Real 3D structure from PubChem.
CTP — C9H16N3O14P3, 483.16 g/mol. Real 3D structure from PubChem.
5-methyl-2'-deoxycytidine — C10H15N3O4, 241.24 g/mol. Real 3D structure from PubChem.
8-oxoguanine — C5H5N5O2, 167.13 g/mol. Real 3D structure from PubChem.
Adenine — C5H5N5, 135.13 g/mol. Real 3D structure from PubChem.
Guanine — C5H5N5O, 151.13 g/mol. Real 3D structure from PubChem.
Cytosine — C4H5N3O, 111.1 g/mol. Real 3D structure from PubChem.
Thymine — C5H6N2O2, 126.11 g/mol. Real 3D structure from PubChem.
Uracil — C4H4N2O2, 112.09 g/mol. Real 3D structure from PubChem.